PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_16896-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 226aa    MW: 24444.6 Da    PI: 5.1073
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_16896-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.76.5e-1162108455
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      ++ ++Er RR+ +N+++  Lr+++P+      +K++Ka+i + A+ YI +Lq
  TRIUR3_16896-P1  62 KNIINERHRRRMLNEKLYALRRVVPNI-----TKMDKASIIQDAIAYIEELQ 108
                      57799*********************7.....7******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.20E-1251112No hitNo description
PROSITE profilePS5088815.21258107IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.75E-1560116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-862108IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.6E-1364113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.3E-1365114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    Send to blast
MASSDMDVSL DFSWEALVLE LGDADSMHLP AEDSLSGLCD DSTSSPDGAT SRSTKASSLE  60
RKNIINERHR RRMLNEKLYA LRRVVPNITK MDKASIIQDA IAYIEELQEQ ERQILAALRT  120
DSCTAVAKVD DAASTGSNAE DHGVGSSPRK KMRRTTSASS INGAFCSPST HPVQIFEVSL  180
LELVNLARYA PIGCCQLATS EICTNRVLLA SFTSISLVIN PCSCTG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3651950.0AK365195.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2031O06.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003580572.16e-45PREDICTED: transcription factor bHLH35-like
TrEMBLM7Y8X21e-166M7Y8X2_TRIUA; Transcription factor bHLH35
STRINGMLOC_13653.16e-98(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP104438133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.15e-22bHLH family protein